Publications

Last updated: 04.26.22

ResearchGate profile — Google ScholarOrcid

PEER-REVIEWED PUBLICATIONS (mentored student co-authors)

18. Scarpitti, E.A. and Calede, J.J.M. 2022. Ecological correlates of the morphology of the auditory bulla in rodents: applications to the fossil record. Journal of Anatomy 240:647-668. http://doi.org/10.1111/joa.13579

17. Calede, J.J.M. and Brown, A. 2021. Sexual dimorphism in cranial shape and size in geomyoid rodents: multivariate and evolutionary perspectives. Current Zoology doi:10.1093/cz/zoab070: 1-18.
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16. Orcutt, J.D.* and Calede, J.J.M.* 2021. Quantitative analyses of feliform humeri reveal the existence of a very large cat in North America during the Miocene. Journal of Mammalian Evolution 28:729-751.

15. Tse, Y.T., and Calede, J.J.M. 2021. Quantifying the link between craniodental morphology and diet in Soricidae using geometric morphometrics. Biological Journal of the Linnean Society 133:28-46.

14. Calede, J., and Samuels, J. X. 2020. A new species of Ceratogaulus from Nebraska and the evolution of nasal horns in Mylagaulidae (Mammalia, Rodentia, Aplodontioidea). Journal of Systematic Palaeontology 18: 1395-1414.

13. Calede, J. 2020. Pattern and processes of the mammalian turnover of the Arikareean in the northern Rocky Mountains. Journal of Vertebrate Paleontology 40: e1767117.

CR2012. Calede, J., and Rasmussen, D.L. 2020. New gophers (Rodentia: Geomyidae) from the Cabbage Patch beds of Montana (Renova Formation) and the phylogenetic relationships within Entoptychinae. Annals of Carnegie Museum 86: 107-167.

11. Calede, J., Samuels, J.X., and Chen, M. 2019. Locomotory adaptations in entoptychine gophers (Rodentia: Geomyidae) and the mosaic evolution of fossoriality. Journal of Morphology 280: 879-907.

10. Calede, J., Orcutt, J.D., Kehl, W.A., and Richards, B.D. 2018. The first tetrapod from the mid-Miocene Clarkia lagerstätte (Idaho, USA). PeerJ 6:e4880.
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9. Calede, J., Kehl, W.A., and Davis, E.B. 2018. Craniodental morphology and diet of Leptarctus oregonensis (Mammalia, Carnivora, Mustelidae) from the Mascall Formation (Miocene) of central Oregon. Journal of Paleontology 92: 289-304.

8. Calede, J. and Glusman, J. 2017. Geometric morphometric analyses of worn cheek teeth help identify extant and extinct gophers (Rodentia: Geomyidae). Palaeontology 60: 281-307.

7. Wilson, G., Ekdale, E., Hoganson, J., Calede, J., and Vander Linden, A. 2016. A large carnivorous mammal from the Late Cretaceous and the North American origin of marsupials. Nature Communications 7: 13734.
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Press release

6. Calede, J. 2016. Comparative taphonomy of the mammalian remains from the Cabbage Patch beds of western Montana (Renova Formation, Arikareean): contrasting depositional environments and specimen preservation. Palaios 31: 497-515. → Cover article

5. Calede, J2014. Skeletal morphology of Palaeocastor peninsulatus (Rodentia, Castoridae) from the Fort Logan Formation of Montana (Early Arikareean): ontogenetic and paleoecological interpretations. Journal of Mammalian Evolution 21: 223-241.

4. Davis, E. B., and Calede, J. 2012. Extending the utility of artiodactyl postcrania for species-level identifications using multivariate morphometric analyses Paleontologia Electronica 15.1.1A. → Full text/PDF

3. Calede J., and Hopkins, S.S.B. 2012. Intraspecific versus interspecific variation in Miocene Great Basin mylagaulids: implications for evolutionary history. Zoological Journal of the Linnean Society 164:427–450.
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2. Calede, J., and Hopkins, S.S.B. 2012. New material of Alphagaulus pristinus (Mammalia: Rodentia: Mylagaulidae) from the Deep River Formation (Montana, USA): implications for ecology, ontogeny, and phylogeny. Journal of Vertebrate Paleontology 32:151–165.

1. Calede, J., Hopkins, S.S.B., and Davis, E.B. 2011. Turnover in burrowing rodents: the role of competition and habitat change. Palaeogeography, Palaeoclimatology, Palaeoecology 311:242–255.

OTHER PUBLICATIONS

Calede, J. 2020. Review of the “Foundations of Paleoecology: Classic Papers with Commentaries” Edited by S.K., Lyons et al. Quarterly Review of Biology 95:338.

Calede, J. 2017. Review of the “The Princeton Field Guide to Prehistoric Mammals” by D.R., Prothero. Quarterly Review of Biology 92:308.

Calede, J., and Rasmussen, D.L.R. 2015. Field guide to the geology and paleontology of the Cabbage Patch beds in the Flint Creek basin of western Montana (Renova Formation, Arikareean). Northwest Geology 44: 157-188. → Field guide for Tobacco Root Geological Society Field Trip

Calede, J. 2012. Biogeography and endemism in Arikareean faunas (North America, 30-18.8 Ma). Electronic Journal of Applied Multivariate Statistics 4:12–22. → In-house journal

CONFERENCE PRESENTATIONS (mentored student co-authors)

Calede, J.J.M. 2022. An updated phylogenetic framework for fossil Sminthidae (Rodentia, Dipodoidea): biogeographic implications. Annual meeting of the Society for Integrative and Comparative Biology.

Poorboy, D.M., Calede, J., Chavez, A.S. 2022. Variation in ecomorphology between co-occurring pine squirrels. Annual meeting of the Society for Integrative and Comparative Biology.

Noftz, L., and Calede, J.J.M. 2022. Multivariate analyses of cranial morphology inform the taxonomy and evolution of geomyoid rodents. Annual meeting of the Society for Integrative and Comparative Biology.

Ball, M., and Calede, J.J.M. 2022. Bite force estimates in geomyoid rodents: ecological and evolutionary implications. Annual meeting of the Society for Integrative and Comparative Biology.

Hunt, M., Calede, J.J.M., Claxton, A., and Jiménez-Hidalgo, E. 2021. Comparative analysis of body size evolution within pocket gophers (Rodentia, Geomyidae). Annual Meeting of the Geological Society of America.

Calede, J.J.M. and Claxton, A. 2021. The diversification of the Entoptychinae during the Oligocene: insights from the great northwest. Annual Meeting of the Geological Society of America.

Calede, J.J.M. and Smiley, T.M. 2021. A database of rodent body mass for the end Oligocene through Pliocene. Annual Meeting of the Society of Vertebrate Paleontology.

Kort, A.E., Hicks, E.J., Calede, J., and Smiley, T.M. 2020. Quantifying individual variation and wear in the extinct pocket gopher Entoptychus (Mammalia, Rodentia). Annual Meeting of the Society of Vertebrate Paleontology.

Claxton, A., and Calede, J. 2020. A new species of Gregorymys from the Arikareean of South Dakota and the phylogenetics of Entoptychinae (Mammalia, Rodentia, Geomyidae). Annual Meeting of the Society of Vertebrate Paleontology.

Tse YT., and Calede J. 2020. First determination of the dietary ecology of two Oligo-Miocene-aged shrews, Domnina and Pseudotrimylus, using geometric morphometrics. Annual Meeting of the Society of Vertebrate Paleontology.

Scarpitti, E., and Calede, J. 2020. The morphology of the auditory bulla enables locomotory inferences in extinct Rodentia. Annual Meeting of the Society of Vertebrate Paleontology.

Hunt, M., Calede, J., Jiménez-Hidalgo, E., and Claxton, A. 2020. Contrasting the body mass evolution of entoptychine and geomyine gophers. Annual Meeting of the Society of Vertebrate Paleontology.

Tantash, A., and Calede, J. 2020. The coevolution (or lack thereof) of body mass and locomotion in rodents. Annual Meeting of the Society of Vertebrate Paleontology.

Scarpitti, E., and Calede, J. 2020. Association between tympanic bulla morphology and locomotion in rodents: application to the fossil record. Annual Meeting of the Geological Society of America.

Calede J. 2020. Climatic drivers of body size in living geomyoids and Oligocene paleoenvironments. Annual Meeting of the Society of Vertebrate Paleontology.

Calede J. 2020. Evidence for a semi-aquatic ecology in a 30-million-year-old beaver and the evolution of locomotion in Castoridae. Annual Meeting of the Society for Integrative and Comparative Biology.

Tse YT., and Calede J. 2020. Quantifying the link between cranial morphology and diet in Soricidae using geometric morphometrics. Annual Meeting of the Society for Integrative and Comparative Biology.

Hopkins, S.B.B., and Calede J. 2019. Oligo-Miocene aplodontioid rodents reveal faunal and ecological relationships between central Oregon and western Montana. Annual Meeting of the Society of Vertebrate Paleontology.

Orcutt J., and Calede J. 2019. Cat’s cradle: phylogeny, function, body size, and the tangled web of felid systematics. Annual Meeting of the Geological Society of America.

Samuels J., Calede J., and Hunt R. 2019. A new large kangaroo rat-like rodent from the early Miocene of Oregon and the phylogeny of early heteromyids. North American Paleontology Convention.

Calede, J., and Brown, A.C. 2018. Cranial disparity in extant geomyoid rodents: implications for species boundaries in the fossil record. Annual Meeting of the Geological Society of America.

Calede, J. 2018. The phylogenetic relationships of entoptychine gophers and the rise of biological diversity in burrowing rodents. Annual Meeting of the Society of Vertebrate Paleontology.

Strömberg, C.A.E., Fredrickson, E.K., Harris, E.B., Calede, J., Ibanez-Mejia, M., Rasmussen, D., Sheldon, N., and Smith, S.Y. 2017. Refining the timing for the mid-Cenozoic grassland expansion in the continental interior of the U.S. Annual Meeting of the Geological Society of America.

Calede, J., Famoso, N., and Hopkins, S.S.B. 2017. Do changes in the tooth morphology of mylagaulid rodents reflect adaptations to a changing environment? Annual Meeting of the Geological Society of America.

Calede, J. and Hopkins, S.S.B. 2017. X-ray micro-computed tomography of premolars informs the taxonomy of the Mylagaulidae (Mammalia: Rodentia). Annual Meeting of the Society of Vertebrate Paleontology.

Orcutt, J.D., Calede, J., and Richards, B.D. 2017. First occurrence of a mammal from the mid-Miocene Clarkia fossil beds. Annual meeting of the Geological Society of America Rocky Mountain Section.

Calede, J. 2016. Quantitative biostratigraphy and faunal turnover of the Arikareean-aged Cabbage Patch beds of western Montana (Renova Formation). Annual Meeting of the Society of Vertebrate Paleontology.

Orcutt, J, Calede, J., Hopkins, S. 2016. Testing the diagnostic potential of felid postcrania using geometric morphometrics. Annual Meeting of the Society of Vertebrate Paleontology.

Calede, J. 2016. Mammalian biodiversity in the northern Rocky Mountains during the Arikareean: five million years of faunal change through the Cabbage Patch beds (Renova Formation). Annual Meeting of the Northwest Scientific Association.

Calede, J., Samuels, J., and Chen, M. 2016. A multi-proxy analysis of the locomotion of entoptychine gophers (Mammalia: Rodentia: Geomyidae) from the Oligocene of North America. Annual meeting of the Society for Integrative and Comparative Biology.

Calede, J., and Cairns, K. 2015. First evidence of a smooth-incisor sicistine (Rodentia: Dipodidae) in North America from the Cabbage Patch beds of western Montana. Annual meeting of the Society of Vertebrate Paleontology.

Calede, J. 2015. Taxonomy and biostratigraphy of the mammalian fauna from the Cabbage Patch beds (Renova Formation): affinities with Arikareean faunas of the Great Plains and Oregon. Northwest Geology 44: 1-3.

Whisler, Z., and Calede, J. 2014. Two new species of shrews (Mammalia: Eulipotyphla: Soricidae) from the late Oligocene Cabbage Patch beds of western Montana: exceptional preservation reveals niche partitioning. Annual meeting of the Geological Society of America.

Calede, J. 2014. Taxonomic and ecological changes in rodent faunas of the late Oligocene Cabbage Patch beds of western Montana: response to environmental change? Annual meeting of the Geological Society of America.

Calede, J. 2014. Depositional environments and breakage pattern of mammalian bones from the Cabbage Patch beds of western Montana (Renova Formation, Arikareean). Geological Society of America Abstracts with Programs 46(5):4.

Calede, J. 2014. Depositional environments and specimen preservation in the Arikareean-aged Cabbage Patch beds of western Montana (Renova Formation). Geological Society of America Abstracts with Programs 46(4):13.

Calede, J., and Glusman, J. 2013. Disparity in the molar morphology of extant and fossil gophers (Rodentia: Geomyidae): implications for taxonomic richness. Annual Meeting of the Society for Vertebrate Paleontology.

Calede, J., Rasmussen, D., and Glusman, J. 2013. Taxonomic richness and morphological disparity of entoptychine gophers (Rodentia: Geomyidae) from the Arikareean-aged Cabbage Patch beds of Montana. Annual Meeting of the Society for Cenozoic Research (TerQua)

Calede, J. 2012. Comparative taphonomy of Arikareean deposits of Oregon and Montana. Journal of Vertebrate Paleontology Abstract Volume, 73.

Calede, J. 2012. Functional diversity of early modern mammalian communities 30 to 20 million years ago. Annual Meeting of the Ecological Society of America, Portland.

Calede, J., and Wilson, G. 2011. The last supper before the impact: Mammalian diets across the Cretaceous-Paleogene boundary. Journal of Vertebrate Paleontology Abstract Volume, 82.

Calede, J., and Hopkins, S. 2010. Microwear, diet, and fossoriality in Miocene rodents from the Great Basin. Journal of Vertebrate Paleontology Abstract Volume, 68A.

Hopkins, S., Calede, J., and Gusey, A. 2010, Reconstructing habitat diversity from faunas of the middle and late Miocene of eastern Oregon. Journal of Vertebrate Paleontology Abstract Volume, 107A.

Calede, J., and Hopkins, S.S.B. 2010. Composition and abundance of the Mylagaulidae (Mammalia: Rodentia) fauna in the northern Great Basin. Proceedings of the Oregon Academy of Science, Vol. LXIX.

Kehl, W.A., Calede, J., and Davis, E.B. 2010. A new specimen of Leptarctus oregonensis (Mammalia: Mustelidae) sheds light on the phylogeny of leptarctines. Proceedings of the Oregon Academy of Science, Vol. LXIX.

Calede, J., and Hopkins, S.S.B. 2010. Does the Red Queen control the evolution of fossorial rodents in the Miocene of the southern Columbia Plateau? Integrative and Comparative Biology 2010 (Suppl. 1).

Calede, J., and Hopkins, S.S.B. 2009. Changes in diet through time in the Mesogaulinae (Rodentia: Mylagaulidae) in the context of the spread of grasslands: microwear results using texture analysis at high magnification.  Geological Society of America Abstracts with Programs, Vol. 41, No. 7, p. 391.

Kehl, W.A., Calede, J., and Davis, E.B. 2009. The first occurrence of postcranial elements of a leptarctine (Mammalia: Carnivora: Mustelidae) and new cranial material of Leptarctus oregonensis: implications for the ecology of this exceptionally rare carnivoran taxon. Geological Society of America Abstracts with Programs, Vol. 41, No. 7, p. 391.

Calede, J., and Davis, E.B. 2009. Investigating the paleoecology of the Talpidae (Mammalia: Eulipotyphla) in the Miocene of the northern Great Basin: patterns and processes in mole decline. Journal of Vertebrate Paleontology Abstract Volume 74 A.

Calede, J. 2009. Microwear signature of Erethizon dorsatum (Mammalia: Rodentia: Erethizontidae) in relation to diet. Proceedings of the Oregon Academy of Science, Vol. LXVIII.

Calede, J., and Hopkins, S. 2008. Skeletal morphology and ontogeny of Alphagaulus pristinus (Mammalia: Rodentia: Mylagaulidae), an early burrower from the Barstovian. Journal of Vertebrate Paleontology, Vol. 28, Supplement to Number 3, 59A.